PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu047464.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | C2H2 | ||||||||
Protein Properties | Length: 222aa MW: 24815.3 Da PI: 10.4591 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 18.1 | 7.4e-06 | 71 | 93 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H Oeu047464.1 71 FVCEICSKGFQRDQNLQLHRRGH 93 89*******************88 PP | |||||||
2 | zf-C2H2 | 17.7 | 1e-05 | 147 | 169 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H++t+ Oeu047464.1 147 WKCEKCSKKYAVQSDWKAHQKTC 169 58*******************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MSNVTGEDGS FSSGEFQQVQ LQNQSQGADS ANGSSSRQPP SKKKRNLPGT PDPTADVIAL 60 SPKTLMATNR FVCEICSKGF QRDQNLQLHR RGHNLPWKLK QRTVESSRKR VYICPEPSCV 120 HHNPARALGD LTGIKKHYSR KHGEKKWKCE KCSKKYAVQS DWKAHQKTCG TREYKCDCGT 180 IFSRWQHCIG QFKSVSYLTF NAVKPPGILP GKLPRSKGLT L* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G03840.1 | 2e-79 | C2H2 family protein |