PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu046899.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family M-type_MADS
Protein Properties Length: 333aa    MW: 38493.9 Da    PI: 8.0047
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu046899.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF45.68.8e-151351543
                 SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT CS
       SRF-TF  5 nksnrqvtfskRrngilKKAeELSvLCdaevaviifsst 43
                 n+    vtf kRr+g+ KKA+ELS+LC++++ +i++++ 
  Oeu046899.1 13 NHKACRVTFEKRRKGLEKKAYELSTLCGVKIGMILYGPA 51
                 555668******************************985 PP

Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MGRTKLTLEL RNNHKACRVT FEKRRKGLEK KAYELSTLCG VKIGMILYGP AEGDEPVKPI  60
IWPENREEIE NLISSYKKRS DDDCRQRTYD LSFFFKNKVK KVQEELVRTR NKDIETKYPT  120
WVASYDNLTY DELKYFSSLL QAKIENVKSR INLMNQNQMN AQSVQENIYV YQPKLYYQQQ  180
QFLMPQIIDG SFNMADPRLM MMPMNDGTSS SSSNYICNDE DTFGNYTYSN GGESWGNYIG  240
SEIPVSHGLE FRVLDNVPFS NAEMCCYLPN LYPMPQYSQF PVFSSPTFNC KQLTLKIMLE  300
KMVNGSTLSP NFSGTHLLIN MGPSIFTFYS TR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G55690.15e-18M-type_MADS family protein