PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu046706.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 520aa MW: 56817.5 Da PI: 8.825

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu046706.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14	0.00015	80	100	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++C+k F r nL+ H r H Oeu046706.1 80 CEICNKGFQRDQNLQLHRRGH 100 *******************88 PP
2	zf-C2H2	15.6	4.7e-05	154	176	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H++t+ Oeu046706.1 154 WKCDKCSKKYAVQSDWKAHQKTC 176 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 520 aa Download sequence
MSNMTGDEGS FSSGNTGEIQ HPQEKPQNSI VSNATTNSND SSSQQPPTRK KRNLPGNPDP 60 TAEVIALSPT TLMATNRFLC EICNKGFQRD QNLQLHRRGH NLPWKLRQRT NTEIKKRVYV 120 CPEPSCVHHN PARALGDLTG IKKHYSRKHG EKKWKCDKCS KKYAVQSDWK AHQKTCGTRE 180 YKCDCGTIFS RRDSFITHRA FCDALAEENN KANQNLLSTM GPNLQGQMPE LISTMPINSN 240 ANTPIGLSDF NNPLKSFPPD LVPIPFKPMN IGGGMFLSNS SSLFGSPRSI QSSSSGLQLS 300 SSSSSAHMSA TALLQKAAQM GATASNSINS PMMQKSFVSS MAGPDQVSGT RPSSNVHQSN 360 SYDNFQMQNE QSAFAGINGG GYSSQLMHKS PQEVSDLFDS SKTGGSAVSD MMMYGGMLMN 420 NELNSGFLKN AMEQEDSENS GPVRGRNVVG MNSSGPSRLG GNDVMTVDFL GVGGSRPQNM 480 HQQRLDLEAI NQQRMQVVNP FQQFSHRDSA MEKPLWDDV*

Sequence ? help Back to Top

Protein Sequence Length: 520 aa Download sequence

MSNMTGDEGS FSSGNTGEIQ HPQEKPQNSI VSNATTNSND SSSQQPPTRK KRNLPGNPDP  60
TAEVIALSPT TLMATNRFLC EICNKGFQRD QNLQLHRRGH NLPWKLRQRT NTEIKKRVYV  120
CPEPSCVHHN PARALGDLTG IKKHYSRKHG EKKWKCDKCS KKYAVQSDWK AHQKTCGTRE  180
YKCDCGTIFS RRDSFITHRA FCDALAEENN KANQNLLSTM GPNLQGQMPE LISTMPINSN  240
ANTPIGLSDF NNPLKSFPPD LVPIPFKPMN IGGGMFLSNS SSLFGSPRSI QSSSSGLQLS  300
SSSSSAHMSA TALLQKAAQM GATASNSINS PMMQKSFVSS MAGPDQVSGT RPSSNVHQSN  360
SYDNFQMQNE QSAFAGINGG GYSSQLMHKS PQEVSDLFDS SKTGGSAVSD MMMYGGMLMN  420
NELNSGFLKN AMEQEDSENS GPVRGRNVVG MNSSGPSRLG GNDVMTVDFL GVGGSRPQNM  480
HQQRLDLEAI NQQRMQVVNP FQQFSHRDSA MEKPLWDDV*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G03840.1	1e-101	C2H2 family protein