PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu046647.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 283aa MW: 31316.5 Da PI: 8.1068

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu046647.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.4	0.00049	105	127	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+++Fs+ L H +H Oeu046647.1 105 FQCKTCNRTFSSFQALGGHRASH 127 89**********99999998887 PP
2	zf-C2H2	10.9	0.0014	177	199	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F + L H+r+H Oeu046647.1 177 HECSYCGAEFMSGQALGGHMRRH 199 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 283 aa Download sequence
MEGQNEFDMA PRELSHLVKG KRTKRQRPQS PISIPITTHD PSSKDHGNHH NSSSSAESTT 60 TEEEDTAKCL ILLAQGHHFS SNKDDDDQDF KFNSKKYIEA GTCVFQCKTC NRTFSSFQAL 120 GGHRASHNKP RNTTFVLSDE DQNLDNVSFR QKNSLSSSLS LQLTHPTNKS SSSRKVHECS 180 YCGAEFMSGQ ALGGHMRRHR GGPVATNTTL SLSSPTPALF DNQDSDKLSK KPRNGLSLDL 240 NLPAPEDDPS RTFAFNSKKQ QQQQKEGGLA LYTLPTFVDC HY*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04390.1	7e-43	C2H2 family protein