PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu046611.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 546aa MW: 59557.6 Da PI: 5.2285

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu046611.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	34.8	3e-11	370	412	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + +++ a+iL AveY+k+L Oeu046611.1 370 MAERRRRKKLNDRLYLLRSVVPKiS------RMDRASILGDAVEYLKEL 412 79*******************66......9*************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 546 aa Download sequence
MSWMDGDKEV EETNLWTQSN KNGDLENKDD AELVTLSSFK SMLEAENEAG WYMSVTATPT 60 ATSSHEIDMH GANHLDLGNI SFSPKFIDAD NHHPVLQQVD SSASCSPTSA SVLNSLDPSH 120 QLNYFMPPKN STLMNPIHSN LLEGTFDFGC DNGFLESALN RGTGMLNNCS NDLSTQSQMG 180 TLNWSFNHQF STNNFLQLPQ SSEGFGVMGF GEGSMNGNPL FVNSSKILKP LDGFASIGSQ 240 PTLFQKRAAL RKNLASGSVS NLGSLNLGGE INHSRSSTSL EGFDKKGEFS DVNERKRKNS 300 SGDDGEDFSI DGSNLNYDSD DQFLENSTIN KVEEIGKNGG SSSNVNSTVT CGGSGDHKGK 360 KKGLPAKNLM AERRRRKKLN DRLYLLRSVV PKISRMDRAS ILGDAVEYLK ELLQKINDLH 420 NELESTPSCS SLSPLLNFYP LTPTTPGLLC CIQEELCPSA FVEVRLREGR AVNIHMFCGN 480 RPGLLLSTMR ALDILGLDIQ QAVINCFNGF ALDIFRAEQC KEGQDLNPNH IKAVLQVSAG 540 FHGMV*

Sequence ? help Back to Top

Protein Sequence Length: 546 aa Download sequence

MSWMDGDKEV EETNLWTQSN KNGDLENKDD AELVTLSSFK SMLEAENEAG WYMSVTATPT  60
ATSSHEIDMH GANHLDLGNI SFSPKFIDAD NHHPVLQQVD SSASCSPTSA SVLNSLDPSH  120
QLNYFMPPKN STLMNPIHSN LLEGTFDFGC DNGFLESALN RGTGMLNNCS NDLSTQSQMG  180
TLNWSFNHQF STNNFLQLPQ SSEGFGVMGF GEGSMNGNPL FVNSSKILKP LDGFASIGSQ  240
PTLFQKRAAL RKNLASGSVS NLGSLNLGGE INHSRSSTSL EGFDKKGEFS DVNERKRKNS  300
SGDDGEDFSI DGSNLNYDSD DQFLENSTIN KVEEIGKNGG SSSNVNSTVT CGGSGDHKGK  360
KKGLPAKNLM AERRRRKKLN DRLYLLRSVV PKISRMDRAS ILGDAVEYLK ELLQKINDLH  420
NELESTPSCS SLSPLLNFYP LTPTTPGLLC CIQEELCPSA FVEVRLREGR AVNIHMFCGN  480
RPGLLLSTMR ALDILGLDIQ QAVINCFNGF ALDIFRAEQC KEGQDLNPNH IKAVLQVSAG  540
FHGMV*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	360	378	KKKGLPAKNLMAERRRRKK
2	372	379	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-104	bHLH family protein