PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu046551.3

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

AP2

Protein Properties

Length: 587aa MW: 64341.6 Da PI: 5.5701

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu046551.3	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	50.3	6.1e-16	415	466	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g Oeu046551.3 415 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAAIKFRG 466 57**************988532...5***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 587 aa Download sequence
MAPENNWLSF SLSSMEMLNS SSQAPLQSTM ELAPFEASSA SGSHRLYSFA DNFDVNGWYN 60 QKPQAMYSDA ENHQVKENNF FNFTSYMDPY MHQNMQPPPK LEDFLGGDST EIQDSSLTHI 120 YEHHQTGGGD AYFSNNEQQH LKTITGFQSF PANSGSEVDD SAFTGHTQSP VESGSELVAY 180 GQCPISAAAA NTTNALSLGV NNNAQFSESN NKAIVCVDSE SSKRVTDTFD TGGQEDMKRI 240 YGITAVEERA KQEKGVKVTE TQTQVAKETD EELIKWAAIL FKFGGGGGTG YDSMGLTKLS 300 LSHLILMLCK LLGRLDCGYS LSEQLMWKNW EDVGHTVPAG KGLHVQCTWV SGYDKEDKAA 360 RAYDLAALKY WGVTATTNFP ITNYTKELED MKQVTKQEFI ASLRRKSSGF SRGASIYRGV 420 TRHHQQGRWQ ARIGRVAGNK DLYLGTFATE EEAAEAYDIA AIKFRGASAV TNFEMSRYDV 480 DSIAKSPLPV GGTAKRLKLS LEAKEKPLTN ADLQIQSSSN SINFASLQQP VSTIPCGIPF 540 DVNLFHHLHP TNAGVSAASG AAANMVTPMP FMPSPADFFI WPHQSY*

Sequence ? help Back to Top

Protein Sequence Length: 587 aa Download sequence

MAPENNWLSF SLSSMEMLNS SSQAPLQSTM ELAPFEASSA SGSHRLYSFA DNFDVNGWYN  60
QKPQAMYSDA ENHQVKENNF FNFTSYMDPY MHQNMQPPPK LEDFLGGDST EIQDSSLTHI  120
YEHHQTGGGD AYFSNNEQQH LKTITGFQSF PANSGSEVDD SAFTGHTQSP VESGSELVAY  180
GQCPISAAAA NTTNALSLGV NNNAQFSESN NKAIVCVDSE SSKRVTDTFD TGGQEDMKRI  240
YGITAVEERA KQEKGVKVTE TQTQVAKETD EELIKWAAIL FKFGGGGGTG YDSMGLTKLS  300
LSHLILMLCK LLGRLDCGYS LSEQLMWKNW EDVGHTVPAG KGLHVQCTWV SGYDKEDKAA  360
RAYDLAALKY WGVTATTNFP ITNYTKELED MKQVTKQEFI ASLRRKSSGF SRGASIYRGV  420
TRHHQQGRWQ ARIGRVAGNK DLYLGTFATE EEAAEAYDIA AIKFRGASAV TNFEMSRYDV  480
DSIAKSPLPV GGTAKRLKLS LEAKEKPLTN ADLQIQSSSN SINFASLQQP VSTIPCGIPF  540
DVNLFHHLHP TNAGVSAASG AAANMVTPMP FMPSPADFFI WPHQSY*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10510.1	3e-86	AP2 family protein