PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Oeu046465.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 144aa MW: 16563.1 Da PI: 9.57 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 18.8 | 4.6e-06 | 68 | 90 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cgk+F k + ++H +++ Oeu046465.1 68 FVCTKCGKPFAVKGDWRTHEKNC 90 89*****************9987 PP | |||||||
2 | zf-C2H2 | 10.7 | 0.0017 | 97 | 113 | 5 | 21 |
TTTEEESSHHHHHHHHH CS zf-C2H2 5 dCgksFsrksnLkrHir 21 +Cg F++k +Lk Hi+ Oeu046465.1 97 ICGSDFKHKRSLKDHIK 113 8**************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 144 aa Download sequence |
MHMWGHGSQY RKGPESLRGT QPTGMLRLPC YCCASGCKHN IDHPTARPLK DFRILQTHYK 60 RKHGTKSFVC TKCGKPFAVK GDWRTHEKNC GKIWYCICGS DFKHKRSLKD HIKAFGFGHQ 120 TLGIRIDFEE DDENLLETFH LKV* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G57670.1 | 4e-81 | C2H2 family protein |