PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu045757.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 163aa MW: 17781.4 Da PI: 8.939 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 24.9 | 2.5e-08 | 2 | 24 | 26 | 48 |
HHHHHHT-EEEEEEE-TTSEEEE CS SRF-TF 26 ELSvLCdaevaviifsstgklye 48 ELSvLCd++++ +i++++gk+ + Oeu045757.1 2 ELSVLCDVKACAVILGPDGKIET 24 9*******************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 163 aa Download sequence |
MELSVLCDVK ACAVILGPDG KIETRPENRS DVQDVIDLFK KDCLNNKKRK QNNNDHGCKK 60 KQVLGGDEGV VEDFLKKVEN KLDQVKKRIK EIKTKDQEAG SASEIGNPLS GGIPPNVWPP 120 KSSQNLSSYF NAGMLGFGNQ LPGNIMSSTP VRALSIYVVM TH* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G39810.1 | 1e-08 | M-type_MADS family protein |