PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu045757.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family M-type_MADS
Protein Properties Length: 163aa    MW: 17781.4 Da    PI: 8.939
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu045757.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF24.92.5e-082242648
                 HHHHHHT-EEEEEEE-TTSEEEE CS
       SRF-TF 26 ELSvLCdaevaviifsstgklye 48
                 ELSvLCd++++ +i++++gk+ +
  Oeu045757.1  2 ELSVLCDVKACAVILGPDGKIET 24
                 9*******************987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
MELSVLCDVK ACAVILGPDG KIETRPENRS DVQDVIDLFK KDCLNNKKRK QNNNDHGCKK  60
KQVLGGDEGV VEDFLKKVEN KLDQVKKRIK EIKTKDQEAG SASEIGNPLS GGIPPNVWPP  120
KSSQNLSSYF NAGMLGFGNQ LPGNIMSSTP VRALSIYVVM TH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39810.11e-08M-type_MADS family protein