PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu044380.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 424aa MW: 46353.5 Da PI: 5.3111

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu044380.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.8	1.1e-17	49	94	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd +l ++v +G ++W++Iar ++ gR++k+c++rw + Oeu044380.2 49 KGPWSPEEDAILSQLVSNFGARNWSLIARGIP-GRSGKSCRLRWCNQ 94 79****************************.*********985 PP
2	Myb_DNA-binding	54	4e-17	101	145	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r+++T eEd ++++a++ +G++ W++Iar ++ gRt++ +k++w++ Oeu044380.2 101 RKPFTDEEDCIILEAHAVHGNK-WASIARLLP-GRTDNAIKNHWNST 145 789*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MELETQPIAV DGDSTIIGGC SPRDDNDMER LRNGSGGGQG SNKSLDKIKG PWSPEEDAIL 60 SQLVSNFGAR NWSLIARGIP GRSGKSCRLR WCNQLDPAVK RKPFTDEEDC IILEAHAVHG 120 NKWASIARLL PGRTDNAIKN HWNSTLRRRC MQLGKFKLET VNVMEDDSAE KSKASSEETP 180 SYGDANSYKS SGGKDVNSLE RATDNHDHQE ERAQSEGQYI DPSMDDQSID PPTDHPTLFR 240 PVARISAFTV CSSLDGPESL NPRPGPLPLQ GPSIQSSNQS VGIGKLLEGA CGDRLVPHQC 300 GHGCCEIQGG GTQGSCLLGP EFVDYAEPPS LLSHELAALA TDISNVAWRR SGLESSSINA 360 MDNVIARLDE ETDAQLAYWS KRRGSSMHRH SIDDWHAKST CFLIVAYHPS FFPLPFRNIE 420 FNE*

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MELETQPIAV DGDSTIIGGC SPRDDNDMER LRNGSGGGQG SNKSLDKIKG PWSPEEDAIL  60
SQLVSNFGAR NWSLIARGIP GRSGKSCRLR WCNQLDPAVK RKPFTDEEDC IILEAHAVHG  120
NKWASIARLL PGRTDNAIKN HWNSTLRRRC MQLGKFKLET VNVMEDDSAE KSKASSEETP  180
SYGDANSYKS SGGKDVNSLE RATDNHDHQE ERAQSEGQYI DPSMDDQSID PPTDHPTLFR  240
PVARISAFTV CSSLDGPESL NPRPGPLPLQ GPSIQSSNQS VGIGKLLEGA CGDRLVPHQC  300
GHGCCEIQGG GTQGSCLLGP EFVDYAEPPS LLSHELAALA TDISNVAWRR SGLESSSINA  360
MDNVIARLDE ETDAQLAYWS KRRGSSMHRH SIDDWHAKST CFLIVAYHPS FFPLPFRNIE  420
FNE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G09230.1	5e-94	MYB family protein