PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu044213.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 336aa    MW: 38601.5 Da    PI: 8.4603
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu044213.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.21.4e-1670115147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg W + Ed +l+++v ++G+ +W++Ia+++  gR++k+c++rw++ 
      Oeu044213.1  70 RGHWRPHEDAKLKELVSRYGPQNWNLIAEKLK-GRSGKSCRLRWFNQ 115
                      899****************************9.***********996 PP
2Myb_DNA-binding574.5e-18122165146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      r ++T eE+e+l+ a++++G++ W+ Iar ++ gRt++ +k++w+ 
      Oeu044213.1 122 RSSFTDEEEERLLAAHRMYGNK-WAMIARLFP-GRTDNAVKNHWHV 165
                      679*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MREISCGFQD LTFMASPEMG FHYLKAPLQN LKRPWFSPPM EEVRPIKWEN EGTENEETGR  60
KNGHKKICAR GHWRPHEDAK LKELVSRYGP QNWNLIAEKL KGRSGKSCRL RWFNQLDPRL  120
NRSSFTDEEE ERLLAAHRMY GNKWAMIARL FPGRTDNAVK NHWHVIMARK NREQMSVYRR  180
RKPSCLMVQT KGFSLNNIQN NAFGESTMVN DKVVDEYAAS TCIDLSVTPS SVKMPQFFSR  240
FIPVQRHNIL ESKIGLTREE KVLVHSNGQY YDYENEPTEN AAEVDQTGHS DSNSDVTEAS  300
ESVANNMANL YMLGENKNAK FENNAFIDFL GVGAT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69560.16e-70MYB family protein