PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu044057.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 433aa MW: 46640.5 Da PI: 9.9809

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu044057.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.5	0.0001	108	130	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC++C+k + +s+ k H +t+ Oeu044057.1 108 YKCEKCSKKYAVNSDWKAHTKTC 130 9********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence
MAASSSAASF LAMRDQDQNQ MKQPSSSTAP PQKKRKNQPG KSSKSRCRGD STISQDPNGY 60 KQKTTKEVKR KVYLCPEPTC VHHDPSRALG DLTGIKKHYS RKHGEKRYKC EKCSKKYAVN 120 SDWKAHTKTC GTREYRCDCG TLFSRRDSFI THRAFCDALA QESARNLNPT SISSHLFGSS 180 NMSLGISQMS TLFLPESNHD NQSSHGLLSN KSLHGLMHFP ELQKNPNASS SSTAGLFNLS 240 FFSNTNGIDN NNSIANSNNS NNISSSFAAI PSLYSTSLQS HSINTTQMSA TALLQKAAQL 300 GSTTSNTSAS ILKSFGTSSS SGTKSDQPFN SANNFGMVFG ENNGNNFNDL MNSITDGNSS 360 IFGGGSGGVN THPYGGRLTR DFLGVGLVGE IVRNVSGGFG HREQKHGMDL SSLDSEEKTA 420 QKSQPFGGGR FQ*

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence

MAASSSAASF LAMRDQDQNQ MKQPSSSTAP PQKKRKNQPG KSSKSRCRGD STISQDPNGY  60
KQKTTKEVKR KVYLCPEPTC VHHDPSRALG DLTGIKKHYS RKHGEKRYKC EKCSKKYAVN  120
SDWKAHTKTC GTREYRCDCG TLFSRRDSFI THRAFCDALA QESARNLNPT SISSHLFGSS  180
NMSLGISQMS TLFLPESNHD NQSSHGLLSN KSLHGLMHFP ELQKNPNASS SSTAGLFNLS  240
FFSNTNGIDN NNSIANSNNS NNISSSFAAI PSLYSTSLQS HSINTTQMSA TALLQKAAQL  300
GSTTSNTSAS ILKSFGTSSS SGTKSDQPFN SANNFGMVFG ENNGNNFNDL MNSITDGNSS  360
IFGGGSGGVN THPYGGRLTR DFLGVGLVGE IVRNVSGGFG HREQKHGMDL SSLDSEEKTA  420
QKSQPFGGGR FQ*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	33	63	KKRKNQPGKSSKSRCRGDSTISQDPNGYKQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02080.1	4e-88	C2H2 family protein