PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu044053.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C3H
Protein Properties Length: 709aa    MW: 78953.7 Da    PI: 6.298
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu044053.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH17.76.3e-06123143425
                  ---SGGGGTS--TTTTT-SS-S CS
      zf-CCCH   4 elCrffartGtCkyGdrCkFaH 25 
                  ++C ff++ G+C  Gd C+F H
  Oeu044053.1 123 VPCIFFQK-GYCLKGDWCQFLH 143
                  79******.************* PP

Sequence ? help Back to Top
Protein Sequence    Length: 709 aa     Download sequence    
MVGTKPPIES AAVPPAQTVT ASAEEEALKR NTDCVYFLAS PLTCKKGSEC EYRHSDVARV  60
NPRDCWYWLH SNCLNPKCGF RHPPLDGLLE TQAQTSALSA VPPSQAASTP APHVPTASGK  120
QGVPCIFFQK GYCLKGDWCQ FLHAPNSVSN KNIQVPVMST AGPASFKNTF GGPEKYAQEK  180
VPSKTVQKSV ELPLHTKPAM TKPAMKVEPT PARNEFSIGK KTLTTSEMNE EFSVYRPASI  240
SPTNNGKQSS RTIWVQQSHP VDEHGSMNSK DAEEFSREPS PGFDVLVDDE LRDSDYYPGE  300
DQYGMTGNHE GRNDYDIGHS ADYNSMVDVD RDIHRDPRRY DSYERTQGQH AWEQHRASSE  360
RMSGGSAYQN KRHARVNGPD LVSETDLRNH LSKHRRSNGL RSVISHEYTR DRYVDDQGYN  420
VSTRETQYLP PRDSSLSSRL RGRIKLPGRS STLNGRDLQV DREIISGTDH GRSSSGRTQQ  480
SSHHGRLRDI IKGEEDDFNV GGKNNRGANL RREIKGENIT AFAGPKSLAE LKSRKNGKTS  540
EQQSLGKRKH SMLDGYQRPF EGPKPLEEIL KQKRGEITAS GNNKDNNQKE EGMQKMTKIT  600
LTVEDQRALS SAPVNEYSKS ASGDDGAENY RSRDARELES QDGMIVEDRL DDQGHDAYKQ  660
RAGASDYVQV DGECYDDLDE GENGDAEEEY PDDEDGDDFA KKMGVMYS*