PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu044053.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | C3H | ||||||||
Protein Properties | Length: 709aa MW: 78953.7 Da PI: 6.298 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 17.7 | 6.3e-06 | 123 | 143 | 4 | 25 |
---SGGGGTS--TTTTT-SS-S CS zf-CCCH 4 elCrffartGtCkyGdrCkFaH 25 ++C ff++ G+C Gd C+F H Oeu044053.1 123 VPCIFFQK-GYCLKGDWCQFLH 143 79******.************* PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 709 aa Download sequence |
MVGTKPPIES AAVPPAQTVT ASAEEEALKR NTDCVYFLAS PLTCKKGSEC EYRHSDVARV 60 NPRDCWYWLH SNCLNPKCGF RHPPLDGLLE TQAQTSALSA VPPSQAASTP APHVPTASGK 120 QGVPCIFFQK GYCLKGDWCQ FLHAPNSVSN KNIQVPVMST AGPASFKNTF GGPEKYAQEK 180 VPSKTVQKSV ELPLHTKPAM TKPAMKVEPT PARNEFSIGK KTLTTSEMNE EFSVYRPASI 240 SPTNNGKQSS RTIWVQQSHP VDEHGSMNSK DAEEFSREPS PGFDVLVDDE LRDSDYYPGE 300 DQYGMTGNHE GRNDYDIGHS ADYNSMVDVD RDIHRDPRRY DSYERTQGQH AWEQHRASSE 360 RMSGGSAYQN KRHARVNGPD LVSETDLRNH LSKHRRSNGL RSVISHEYTR DRYVDDQGYN 420 VSTRETQYLP PRDSSLSSRL RGRIKLPGRS STLNGRDLQV DREIISGTDH GRSSSGRTQQ 480 SSHHGRLRDI IKGEEDDFNV GGKNNRGANL RREIKGENIT AFAGPKSLAE LKSRKNGKTS 540 EQQSLGKRKH SMLDGYQRPF EGPKPLEEIL KQKRGEITAS GNNKDNNQKE EGMQKMTKIT 600 LTVEDQRALS SAPVNEYSKS ASGDDGAENY RSRDARELES QDGMIVEDRL DDQGHDAYKQ 660 RAGASDYVQV DGECYDDLDE GENGDAEEEY PDDEDGDDFA KKMGVMYS* |