PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu043714.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

NF-YC

Protein Properties

Length: 208aa MW: 23222.9 Da PI: 6.6323

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu043714.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	42.6	1.3e-13	83	120	1	35
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkaded 35 ql++fw++q +e+++dfkn++lPlarikki+kaded Oeu043714.1 83 QLQAFWANQmqeVEHTNDFKNQSLPLARIKKIMKADED 120 89****97777999*******************9 PP
2	NF-YC	41.4	3.1e-13	119	153	67	101
NF-YC 67 eenkrrtlkksdiaaavtrtdifdflvdivprdel 101 e+nkrrtl+k+diaaa++rtd+fdflvdi+prdel Oeu043714.1 119 EDNKRRTLQKNDIAAAISRTDVFDFLVDIIPRDEL 153 689******************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 208 aa Download sequence
MNQSDHILQQ QHQNLQQQQP VVGVVPGSGQ MTYANPYQAA HVVATGTPAV AISSPSTYPA 60 SQLAYHHQPQ QFNSQQLQQS QQQLQAFWAN QMQEVEHTND FKNQSLPLAR IKKIMKADED 120 NKRRTLQKND IAAAISRTDV FDFLVDIIPR DELREEGLAG MIMGKPVDQS ALFTGQHPQQ 180 PPPYMSWPPS QGQLSQPQER QSDTTKG*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	123	129	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56170.1	2e-32	NF-YC family protein