PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu043175.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | LBD | ||||||||
Protein Properties | Length: 210aa MW: 23257.7 Da PI: 6.4957 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 69.8 | 5.6e-22 | 6 | 53 | 1 | 48 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllka 48 +Ca+Ck+lrr+Ca+dCv+apyfp+++p+kfa+vhk+FGasn++k+l+ Oeu043175.1 6 PCASCKLLRRRCAQDCVFAPYFPSDDPHKFAIVHKVFGASNISKMLQV 53 7********************************************986 PP | |||||||
2 | DUF260 | 59.6 | 8.9e-19 | 89 | 144 | 45 | 100 |
DUF260 45 llkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +k+lp ++r da+sslvyeA+arardPvyG+vgvi+ lq+q++ql+ ela++++e Oeu043175.1 89 NVKELPLHQRVDAVSSLVYEANARARDPVYGCVGVISYLQNQVSQLQMELAVAQAE 144 57899**********************************************99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MGGNPPCASC KLLRRRCAQD CVFAPYFPSD DPHKFAIVHK VFGASNISKM LQVVAVVGGW 60 VGLIFGLRST YVYLSWALDA ARIEFISWNV KELPLHQRVD AVSSLVYEAN ARARDPVYGC 120 VGVISYLQNQ VSQLQMELAV AQAETLCIQM QQEPAPIATN PIMLEAQDDK SSFFLHQNNL 180 PQFLSFSSSN NVIFDSFKKE SIFGQDMIS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G30130.1 | 2e-65 | LBD family protein |