PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu043037.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 320aa    MW: 36788.7 Da    PI: 9.8521
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu043037.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.22.6e-15133179148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      +g WT eEd ll ++v ++G ++W  Ia++++ +R +kqc++rw+++l
      Oeu043037.1 133 KGQWTLEEDRLLSELVGKHGVRNWCVIAQKLP-RRLGKQCRERWHNHL 179
                      799*****************************.*************97 PP
2Myb_DNA-binding57.43.4e-18185227145
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                      +++W++eEd++l++a+k+lG++ W+ Iar++  gR+++ +k++w+
      Oeu043037.1 185 KDKWSEEEDKRLIEAHKELGNR-WSQIARRLS-GRSENTIKNHWN 227
                      689*******************.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MEIDTSSKEN QILRRKPCGE GFLLGFSSFS TLSHRSLEGS LNPFSSFSAP SDDPFHRNKL  60
STKFAEDSVE AQIMMHGLQP RILLDLNSES SLQTMDQCQI NEPLNLNSCL VFDRKLERRI  120
DLNNKSKKSN IIKGQWTLEE DRLLSELVGK HGVRNWCVIA QKLPRRLGKQ CRERWHNHLK  180
PDIKKDKWSE EEDKRLIEAH KELGNRWSQI ARRLSGRSEN TIKNHWNATK RRLLSRKRDN  240
PNTNTLLQSY IKSVMSSLGC KESLGNSSLP SISSNGTMAN SMQREQIEMK SETDARMEVQ  300
FDMQKQMDFM GISSSNYNI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18770.19e-53MYB family protein