PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu043001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 71aa MW: 7780.3 Da PI: 10.79 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 42 | 1.2e-13 | 18 | 51 | 8 | 42 |
HHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS SRF-TF 8 nrqvtfskRrngilKKAeELSvLCdaevaviifss 42 + qvt+ kRr g++KK +E S+LCdae+a+iifs Oeu043001.1 18 QLQVTLLKRR-GVFKKTQEPSTLCDAEIALIIFSA 51 458*****98.9*********************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 71 aa Download sequence |
MARKKIQIKK IDNLTAHQLQ VTLLKRRGVF KKTQEPSTLC DAEIALIIFS ALEKSSIVLA 60 QGFLISSPLS * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24540.1 | 4e-17 | MIKC_MADS family protein |