PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu042736.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 1258aa MW: 137748 Da PI: 5.5192

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu042736.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.9	2.3e-08	504	546	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT eE e++vd + +G++ +++Ia+ + ++ +c+++++k + Oeu042736.1 504 WTSEEREIFVDKLATFGKD-FSKIASFLD-YKSTADCIEFYYKNR 546 ***************99.*****.9*********975 PP
2	Myb_DNA-binding	25.4	3.3e-08	697	737	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT eE +++ +G++ ++ I+r++ +R+ ++ck ++ Oeu042736.1 697 DWTDEEKSVFIQTLSSHGKD-FAMISRCIR-TRSTYECKVFFS 737 6***************99.*****.******8876 PP

Sequence ? help Back to Top
Protein Sequence Length: 1258 aa Download sequence
MHDKNGGNTD GLVCKGQKLE KENSLGSIDW KSLKWTRSGS LSSKGSGFSL SSTSKSMGAN 60 SNDTVSAMPV QSPSMDAAAC PMSAATASSE DTSSKKKPRL RWGEGLKKYE KKKVEGPEDG 120 TARNEFVISD SDTETVLSNP MNLADKSPKA ALLLECASRA TPSSVVCSSS PGVQEKQSVK 180 AVSYDHDMTK LSCSPSILSQ MQCEGPTFNL ENFELSSIAN LSSSIGELLR SDDTNSLDTG 240 FVQTTAMNKL LSWKVDVLKA LEKTESEIES LETEFRSSIS EAGSSFPHPS ASCMLPASCS 300 NSCRDREDIY NLILATNKDS ADRASEVLNK LMPANQCHSD ISTATSVSYL PNDCMLMKKK 360 FLTRKQFIRF NEKVTTLKFK VFHHFWKENQ LLSVRRVPMK SHKKLDLSRT EYFGYPKHHS 420 SCRSRFSSPV YADGNLSMVP TEEVIDYVSR LLSNSEVKPY RNALKMPVLI LDNKEKFMSR 480 FISSNGLVED PCAVEKERSM INIWTSEERE IFVDKLATFG KDFSKIASFL DYKSTADCIE 540 FYYKNRKSEY FEKAKKKTGF PKQRPARSSS TYMVASVKRW NREANAASLD ILSAASAVAA 600 SADDGIEIQQ KCTSRFFLGS SAYRESRGDV GSLQRSNSLN IYETDQETTA VDVLAGICGS 660 LSSEAMSSCI TSSVDPAEIY EEVYDSCLDE SCEETTDWTD EEKSVFIQTL SSHGKDFAMI 720 SRCIRTRSTY ECKVFFSKAR KCLGLDMIQP RPHNAVSGDI NGGGSDGAEE ACVVESGSII 780 CSERSGCEMV ENLLSPDLKT SYESDTVGIS TLKHNLNECE KNNGTGFDDF TDAENPGLNH 840 CQGKDKADLD FDADADADAD AHGADGGTVV ASRDTESSRV IEDADNHVQS SRLGETQNAA 900 STEVSDGHRR PGVTSYPCAD AHSSTHLDIT FGCEKKTSTH IASSAAHANA ISEVQRQKIA 960 QTGQHLSGCS FSDCVESSEV LGDFKVPMST VKKKNEDINC KKAVSLQCDA KVDGNFPLDR 1020 SSGFSLQKCS SSRYRNSREA PVQVQGQTTD PCRKGGVKLF GQFLISSQEK QNSCIPANDR 1080 KTPHHKSEKQ PFTGDEINSA QAKFDCDDYP SSESIPITKF LSCDKNKLQS AFPPLPDSTL 1140 MFCQNPAAVT NNAMPSDELK WPLLPPVVKS TECELNGISF FPTQELSSSN QLADYEVPRD 1200 SQVQPFTIDL EMQRIKGFDV MSGTQQPKRE TGGVNVGSQY AGVSDPVEAI KNAICKR*

Sequence ? help Back to Top

Protein Sequence Length: 1258 aa Download sequence

MHDKNGGNTD GLVCKGQKLE KENSLGSIDW KSLKWTRSGS LSSKGSGFSL SSTSKSMGAN  60
SNDTVSAMPV QSPSMDAAAC PMSAATASSE DTSSKKKPRL RWGEGLKKYE KKKVEGPEDG  120
TARNEFVISD SDTETVLSNP MNLADKSPKA ALLLECASRA TPSSVVCSSS PGVQEKQSVK  180
AVSYDHDMTK LSCSPSILSQ MQCEGPTFNL ENFELSSIAN LSSSIGELLR SDDTNSLDTG  240
FVQTTAMNKL LSWKVDVLKA LEKTESEIES LETEFRSSIS EAGSSFPHPS ASCMLPASCS  300
NSCRDREDIY NLILATNKDS ADRASEVLNK LMPANQCHSD ISTATSVSYL PNDCMLMKKK  360
FLTRKQFIRF NEKVTTLKFK VFHHFWKENQ LLSVRRVPMK SHKKLDLSRT EYFGYPKHHS  420
SCRSRFSSPV YADGNLSMVP TEEVIDYVSR LLSNSEVKPY RNALKMPVLI LDNKEKFMSR  480
FISSNGLVED PCAVEKERSM INIWTSEERE IFVDKLATFG KDFSKIASFL DYKSTADCIE  540
FYYKNRKSEY FEKAKKKTGF PKQRPARSSS TYMVASVKRW NREANAASLD ILSAASAVAA  600
SADDGIEIQQ KCTSRFFLGS SAYRESRGDV GSLQRSNSLN IYETDQETTA VDVLAGICGS  660
LSSEAMSSCI TSSVDPAEIY EEVYDSCLDE SCEETTDWTD EEKSVFIQTL SSHGKDFAMI  720
SRCIRTRSTY ECKVFFSKAR KCLGLDMIQP RPHNAVSGDI NGGGSDGAEE ACVVESGSII  780
CSERSGCEMV ENLLSPDLKT SYESDTVGIS TLKHNLNECE KNNGTGFDDF TDAENPGLNH  840
CQGKDKADLD FDADADADAD AHGADGGTVV ASRDTESSRV IEDADNHVQS SRLGETQNAA  900
STEVSDGHRR PGVTSYPCAD AHSSTHLDIT FGCEKKTSTH IASSAAHANA ISEVQRQKIA  960
QTGQHLSGCS FSDCVESSEV LGDFKVPMST VKKKNEDINC KKAVSLQCDA KVDGNFPLDR  1020
SSGFSLQKCS SSRYRNSREA PVQVQGQTTD PCRKGGVKLF GQFLISSQEK QNSCIPANDR  1080
KTPHHKSEKQ PFTGDEINSA QAKFDCDDYP SSESIPITKF LSCDKNKLQS AFPPLPDSTL  1140
MFCQNPAAVT NNAMPSDELK WPLLPPVVKS TECELNGISF FPTQELSSSN QLADYEVPRD  1200
SQVQPFTIDL EMQRIKGFDV MSGTQQPKRE TGGVNVGSQY AGVSDPVEAI KNAICKR*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	95	113	KKKPRLRWGEGLKKYEKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	4e-84	MYB family protein