PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu042246.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 81aa MW: 8971.69 Da PI: 10.302 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 26.6 | 7.9e-09 | 21 | 49 | 17 | 45 |
HHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS SRF-TF 17 rngilKKAeELSvLCdaevaviifsstgk 45 r g++KK +E++v+++ae+a+i+ s t k Oeu042246.1 21 RVGLFKKPSEICVMTGAEIAIILQSLTRK 49 67********************9997654 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 81 aa Download sequence |
MVIMEKKTMG RSKIEMKKIE RVGLFKKPSE ICVMTGAEIA IILQSLTRKC VFTFEHSSVD 60 SVIARFKNGI TSDGTVKNYA * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60440.1 | 1e-16 | M-type_MADS family protein |