PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Oeu041488.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 320aa MW: 35621.6 Da PI: 6.3898 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.8 | 3.7e-16 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+++++ +G+g +W + +++ g++R++k+c++rw++yl Oeu041488.1 14 KGPWSPEEDAKLKNYIESHGTGgNWIALPQKAGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 40.9 | 4.7e-13 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g ++ +Ed ++ +++ G++ W+ Ia++++ gRt++++k++w++ Oeu041488.1 69 GEFSDDEDRIICALFTSIGSR-WSIIAAHLP-GRTDNDIKNYWNT 111 789******************.*********.***********97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 320 aa Download sequence |
MGRSPCCDKA NVKKGPWSPE EDAKLKNYIE SHGTGGNWIA LPQKAGLKRC GKSCRLRWLN 60 YLRPNIKHGE FSDDEDRIIC ALFTSIGSRW SIIAAHLPGR TDNDIKNYWN TKLKKKLMEM 120 APFAHHKRSY HGAICPTTAN SFLQNSSAYH STNNNYYTTP PARVFTGGFE FMSNIPSNIL 180 ENTNSFTTCS SNSSTLTAFQ PQEGLGAGPA QNYQVKDNYN NLLIFGNEAS CSSSDGSGID 240 EDLGLLNYFG SGVDENQKFT LPANGYADDQ NKVTNGCFTE NPLDYSIEEI KQLISTNNIC 300 NNLNYFVDEI KTEEQVLYY* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G36890.1 | 5e-76 | MYB family protein |