PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu041383.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MYB | ||||||||
Protein Properties | Length: 268aa MW: 30434.6 Da PI: 9.1448 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.3 | 2.7e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+ Ed ll+++++q+G g+W++ +++ g+ R++k+c++rw +yl Oeu041383.1 14 KGPWSSKEDTLLKNYIQQHGEGQWRSLPHKAGLLRCGKSCRLRWMNYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 52.3 | 1.3e-16 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ T+eE++++ +++ +lG++ W++Ia +++ gRt++++k++w++ Oeu041383.1 67 RGNITPEEEDIITRLHSLLGNR-WSLIAGRLP-GRTDNEIKNHWNTC 111 7999******************.*********.***********985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 268 aa Download sequence |
MGRSPCCSKV GLQKGPWSSK EDTLLKNYIQ QHGEGQWRSL PHKAGLLRCG KSCRLRWMNY 60 LRPGIKRGNI TPEEEDIITR LHSLLGNRWS LIAGRLPGRT DNEIKNHWNT CMLKKLKNSG 120 IQPKIHKLSM KCLKEKTKSI VPETSITRNF TKKKINDDGN AKNIESNETK TLHIPKPIRV 180 SSTFSRSNSL DSVLSAASSS DDSGVDEQKL NLLSLFELDR ANYGGLDQVW EEDQDFLSTY 240 DYPLHYSDSS STAEMLEKMY DEYLQLL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13540.1 | 5e-63 | MYB family protein |