PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu041348.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | WRKY | ||||||||
Protein Properties | Length: 292aa MW: 32227.7 Da PI: 4.7875 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 85.4 | 5.3e-27 | 100 | 161 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+W+KYGqK++ +++pr+YYrC++ gC+++kkv+rs++dp+vveitY geH+++ Oeu041348.1 100 LDDGYSWKKYGQKDILRAKYPRGYYRCSHGrgkGCTATKKVQRSNNDPSVVEITYIGEHTCN 161 59***************************88889**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 292 aa Download sequence |
MENSADLELK SLMNELTQGR ELAEQLRISL NTLSSSDESC EFLIQRIKNS YEKALSMLNN 60 DDDLDREFKE YQNTTRKRKA MTTSTKKVQL CPGIGLEEQL DDGYSWKKYG QKDILRAKYP 120 RGYYRCSHGR GKGCTATKKV QRSNNDPSVV EITYIGEHTC NHVSSSNPTP TLPENDIFPD 180 TNQSFQAFNS LPSSSIIPET YIFHNAMMDN DVLGTFTSPT TSVSTYFAIS PTLTSDYGGN 240 NAQASQSEAI APFTSSATSS GINSPVVGLD FPFAPTEIDS NFPFGSLGFF P* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G24110.1 | 5e-38 | WRKY family protein |