PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu041037.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB_related
Protein Properties Length: 298aa    MW: 33913.4 Da    PI: 5.1471
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu041037.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding59.57.4e-192365145
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     ++ WT +E+ +l++a+++lG++ W+ Ia++++ gRt +++k++w+
      Oeu041037.1 23 KNVWTDDEERRLIQAHERLGNR-WAEIAKYIP-GRTKNSIKNHWN 65
                     678*******************.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MVGRVRKSCR ARWNNHLNPH IKKNVWTDDE ERRLIQAHER LGNRWAEIAK YIPGRTKNSI  60
KNHWNATKRR DYNIKMYFNN GSTSTNSNSG TTTTATNPSN AGTPLSSDED FSPFFNLKSC  120
NKELDFMETL FENNQSIDSI PVDHCQPMNP AEGTSENTYS FNIDENYNHP IIFFTSLEIL  180
QTTNSQLPAV EYVENDLFHY APNPMGNKFF HSENSNLIME FNSNFRSVET EASQIYPDEL  240
YFSYQWDGGN AGSVNLTTNL PTINLGTTFG STMDTNLMDM VSSSQLPPQL SPYNGFF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58850.12e-29MYB family protein