PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu040698.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 260aa MW: 29137.1 Da PI: 9.1605 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 57.8 | 1.9e-18 | 93 | 147 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++k+q +Lee F+++++++ +++ L+k+lgL rqV vWFqNrRa+ k Oeu040698.1 93 RKKLRLSKDQSAILEESFKEHNTLNPKQKLALSKRLGLRPRQVEVWFQNRRARTK 147 788899***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 126.9 | 8.9e-41 | 93 | 182 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rlsk+q+++LEesF+e+++L+p++K +l+++Lgl+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+e+n+rL+kev+eLr +l Oeu040698.1 93 RKKLRLSKDQSAILEESFKEHNTLNPKQKLALSKRLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEQNRRLQKEVQELR-AL 182 69*************************************************************************************9.55 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MSPSSNTSLQ LNLMPSWPSS DRETRTFLKG IDVNRLPKAA DLEEEAGVSS PNSTISSVSG 60 KRSEREPTGS DDPELERDCS RGISDEEDGD GSRKKLRLSK DQSAILEESF KEHNTLNPKQ 120 KLALSKRLGL RPRQVEVWFQ NRRARTKLKQ TEVDCEFLKR CCENLTEQNR RLQKEVQELR 180 ALKLSPQMYM QMTPPTTLTM CPSCERVAVP PTPSSTAKLV TSVEPLPCRV GPAQSRPITF 240 NPWAAAVPRR PFDALSTRQ* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 92 | 98 | SRKKLRL |
2 | 142 | 150 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16780.1 | 1e-97 | HD-ZIP family protein |