PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu040584.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | LBD | ||||||||
Protein Properties | Length: 208aa MW: 22738.1 Da PI: 8.7646 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 93.7 | 2.1e-29 | 2 | 105 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93 +C++C+vlr++C+++C+l+p++ +q ++ +v+k+FG++ ++++++a+p ++r++a++sl+yeA r+ +P++Gavg++++++++++q+++e Oeu040584.1 2 SCNGCRVLRKGCSENCILRPCLqwiesSIAQGYATVFVAKFFGRAGLMSFISAVPVNHRPAAFQSLLYEAAGRTVNPINGAVGLLSTGNWNVCQAAVE 99 6*********************8876444778999*************************************************************** PP DUF260 94 lallke 99 ++l++ Oeu040584.1 100 TVLQGG 105 998765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 208 aa Download sequence |
MSCNGCRVLR KGCSENCILR PCLQWIESSI AQGYATVFVA KFFGRAGLMS FISAVPVNHR 60 PAAFQSLLYE AAGRTVNPIN GAVGLLSTGN WNVCQAAVET VLQGGKLLPI SLDDSLECTA 120 DIYKLQNPSL NSRHKVQKRR RLPDELGKLM QEADLDLSLT SGFEWKTPSP FAEKRRIGSP 180 SMNSEESGTS TCENQLPSKR KLLNLFN* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 138 | 142 | KRRRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67420.1 | 1e-73 | LBD family protein |