PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu040096.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

TCP

Protein Properties

Length: 357aa MW: 38496.5 Da PI: 9.0193

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu040096.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	113.8	2.3e-35	71	205	2	122
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.........ssssaseceaesssssasnsssg.. 88 g+kdrhsk+ T++g+RdRRvRls+++a++f+dLqd+LG+d++sk+ieWLl++a ++i el+ + ++ ++ss++++ + Oeu040096.1 71 SGGKDRHSKVLTSKGPRDRRVRLSVSTAIQFYDLQDRLGYDQPSKAIEWLLKAAATSISELPPIttafqdnnlK-------QPTEKSSTGDAAY-Qhr 160 579***********************************************************995433333321.......2222222222111.134 PP TCP 89 ..........kaaksaakskksqksaasalnlak.esrakarara 122 + + +++s+ s++s+ s l+l++ e r kar+r+ Oeu040096.1 161 fdeidgdglpNFQHMTPCSSTSETSKGSGLSLSRsENRVKARERQ 205 445558888677777778999999999999999999999999995 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MEVDEIQAHG CKFSRASNGR PDSAKLGLTH KDDEDGEQKR GVGGVDLTGG GGLGRIYGWS 60 SSRIVRVSRS SGGKDRHSKV LTSKGPRDRR VRLSVSTAIQ FYDLQDRLGY DQPSKAIEWL 120 LKAAATSISE LPPITTAFQD NNLKQPTEKS STGDAAYQHR FDEIDGDGLP NFQHMTPCSS 180 TSETSKGSGL SLSRSENRVK ARERQMLMGS PLSPPLTSAS SPLFSLAGDH PELHHFSFLP 240 DQLVSVLPSA RRNENNNSQN QYNLDFTMSP SSSTSGLAGF NRGTLQSNSS SLFPPLHRFS 300 PIDHGSQSFY TGPVALPVQN HHHFLAGFDA GLQLYPGSGG AHGVSRHTGH ESKGKN*

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MEVDEIQAHG CKFSRASNGR PDSAKLGLTH KDDEDGEQKR GVGGVDLTGG GGLGRIYGWS  60
SSRIVRVSRS SGGKDRHSKV LTSKGPRDRR VRLSVSTAIQ FYDLQDRLGY DQPSKAIEWL  120
LKAAATSISE LPPITTAFQD NNLKQPTEKS STGDAAYQHR FDEIDGDGLP NFQHMTPCSS  180
TSETSKGSGL SLSRSENRVK ARERQMLMGS PLSPPLTSAS SPLFSLAGDH PELHHFSFLP  240
DQLVSVLPSA RRNENNNSQN QYNLDFTMSP SSSTSGLAGF NRGTLQSNSS SLFPPLHRFS  300
PIDHGSQSFY TGPVALPVQN HHHFLAGFDA GLQLYPGSGG AHGVSRHTGH ESKGKN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18390.1	1e-41	TCP family protein