PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu040084.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | NF-YA | ||||||||
Protein Properties | Length: 241aa MW: 27299.5 Da PI: 4.9726 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 22.9 | 2.9e-07 | 177 | 203 | 31 | 58 |
CBFB_NFYA 31 deksrkpylheSRhkhAlrRpRgsgGrF 58 d+++ pyl eSR+ hA+rR+R +gG+F Oeu040084.1 177 DADEEPPYLDESRQLHAVRRAR-EGGQF 203 567788****************.99998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MAIRSESTQL HYDFRSSYPL RSPIKINDQL TLVATGLLKT DIFELETVKA CETKMVLGMR 60 AVMFVHQVFV SSIEKWKYKT YDNSEAYEQQ KYSEPQIQSN ATSHSGTAFP NMNYAMPAQL 120 SAENAVAQTP YSYSDPYYRS IFAPYDAQPY PAQPYPAQPM LFLLMGIHQV VVPLPLDADE 180 EPPYLDESRQ LHAVRRAREG GQFKRKSENQ QQEYESGEES QANLNLNSDK KDPTSSENGS 240 * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30500.2 | 1e-10 | NF-YA family protein |