PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu039919.2
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family Trihelix
Protein Properties Length: 305aa    MW: 34468.8 Da    PI: 5.3493
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu039919.2genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix52.51.3e-1620110186
     trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                  +Wt++ + +L++a  ++  +l+rg+l++++W+ev++++     + ++ +r+ +qCk++++ l+k+yk +k+   + + + +s++p+f++l+
  Oeu039919.2  20 CWTEEATSTLVDAWGRRYLELNRGNLRQKDWQEVADAVnarhgHTKKTHRTDVQCKNRIDTLKKKYKIEKAKIAESNGNLTSSWPFFSRLD 110
                  8**************************************999888999**********************999999888889******997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MSDFMESSTP ARQVPFREDC WTEEATSTLV DAWGRRYLEL NRGNLRQKDW QEVADAVNAR  60
HGHTKKTHRT DVQCKNRIDT LKKKYKIEKA KIAESNGNLT SSWPFFSRLD VLIGSNFNKQ  120
QKFTPSPIPL VSQSTPSLPL PSPPMAVPLP FRNLPSAMFP TAILPQKRPF SSSSPPPPMV  180
EESYFRRNYS AMAAAAAAAE DAPDAEDEGD SGGDEIEVSE ERGAEVEEGD EGMRRLAKAI  240
ERFGEIYERV ESMKQRQVME LEKQRMQFAK ELEVQRMQLF MDTQVQLEKI KQAKQAGSSD  300
DIYS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.14e-34Trihelix family protein