PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu039815.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

GRF

Protein Properties

Length: 392aa MW: 42821.7 Da PI: 8.7242

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu039815.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78.8	5e-25	146	189	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCsr+v++g+k+CErH+hrgr+rsrk++e Oeu039815.1 146 DPEPGRCRRTDGKKWRCSRDVVAGQKYCERHVHRGRNRSRKPVE 189 79***************************************987 PP
2	QLQ	46.7	1e-16	74	109	1	36
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 s+F+ aQ+q+L+ Q+l+yK+++a++ vP+eLl ++ Oeu039815.1 74 SYFSLAQWQELELQALIYKHMIAGAAVPSELLHLVK 109 79*****************************98776 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MDFNLKKWRD QHESEEEQQQ IPSAKLPRLL LNSHPQQPPG PALPLFVPNL TSNLSAYSSD 60 STTTSANKAP WMGSYFSLAQ WQELELQALI YKHMIAGAAV PSELLHLVKK SLINSPSPPY 120 YLSQHYYPHY QPGLLQPAYW GKGAMDPEPG RCRRTDGKKW RCSRDVVAGQ KYCERHVHRG 180 RNRSRKPVEI HTSTTTPYSG KAGNNGDGEV LKTSNAVTRE ATGGGGGTMP FSLSGPSPSM 240 DLLHFNQRPS ESIIETKGPF VAQNNSETGG RTLRHFFDDW PRSLQETDNA TSSMASATNL 300 SISMGMGNPS SDFSLKLSTG DNGDDSEPRV INGERDRLQL NWGAPWGTNQ VAPMGGPLAE 360 ALRSSTSNSS PTSVLHQLRR GSVSEASYVG A*

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MDFNLKKWRD QHESEEEQQQ IPSAKLPRLL LNSHPQQPPG PALPLFVPNL TSNLSAYSSD  60
STTTSANKAP WMGSYFSLAQ WQELELQALI YKHMIAGAAV PSELLHLVKK SLINSPSPPY  120
YLSQHYYPHY QPGLLQPAYW GKGAMDPEPG RCRRTDGKKW RCSRDVVAGQ KYCERHVHRG  180
RNRSRKPVEI HTSTTTPYSG KAGNNGDGEV LKTSNAVTRE ATGGGGGTMP FSLSGPSPSM  240
DLLHFNQRPS ESIIETKGPF VAQNNSETGG RTLRHFFDDW PRSLQETDNA TSSMASATNL  300
SISMGMGNPS SDFSLKLSTG DNGDDSEPRV INGERDRLQL NWGAPWGTNQ VAPMGGPLAE  360
ALRSSTSNSS PTSVLHQLRR GSVSEASYVG A*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52910.1	3e-71	GRF family protein