PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu039664.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family LBD
Protein Properties Length: 224aa    MW: 24959.9 Da    PI: 6.3754
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu039664.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260125.33e-3971071100
       DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelall 97 
                  +C aCk+lrrkCak+Cv+apyf++eq  ++fa++hk+FGasnv+kll++lp ++r +a+ +++yeA+ar++dP+yG+v++i++lqqq+ +l+a+la+l
  Oeu039664.1   7 PCGACKFLRRKCAKGCVFAPYFCHEQgVSHFAAIHKVFGASNVSKLLAHLPVTDRCEAAITIAYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLASL 104
                  7*************************77********************************************************************99 PP

       DUF260  98 kee 100
                  ke+
  Oeu039664.1 105 KEQ 107
                  987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MSGSGSPCGA CKFLRRKCAK GCVFAPYFCH EQGVSHFAAI HKVFGASNVS KLLAHLPVTD  60
RCEAAITIAY EAQARLQDPI YGCVSHIFAL QQQVVNLQAQ LASLKEQASQ SLNGSNNGNP  120
NDKFYDESHS FRQDVLSWFQ SCQNQDTMPT YCTNIDNSLT DILYPQRGTM NPIVKCESPV  180
FPQENISYGS MDSLEMQSNN RQWAYPNDFD DFQSVAFRYV QHS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58190.14e-59LBD family protein