PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu039547.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

LBD

Protein Properties

Length: 294aa MW: 33235.3 Da PI: 5.8901

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu039547.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	116.7	1.4e-36	10	106	1	97
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelall 97 aCaaCk +rr+C++dC lap+fpa+qpk f+n+hklFG++n+lk+lk+l++++r +am+s+ y+A++r r PvyG++ i++l q++ ++el+++ Oeu039547.1 10 ACAACKCQRRRCTSDCSLAPHFPADQPKMFQNAHKLFGVKNILKILKQLDQTQRVIAMKSIKYQANMRDRFPVYGCLVEIQQLYCQIQAGEEELQAV 106 7*****************************************************************************************9999876 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
MTLKSGTEQA CAACKCQRRR CTSDCSLAPH FPADQPKMFQ NAHKLFGVKN ILKILKQLDQ 60 TQRVIAMKSI KYQANMRDRF PVYGCLVEIQ QLYCQIQAGE EELQAVLVQL AFYRWNHQQQ 120 QEISLNNEPP SQLQLGVGIV PPENPFSLFH KKFPQSYNAA TALPTAPQPS YSDNGNAAYN 180 INILDSKEDN MVSNLWIQQT LSNSNNNNAN SMAMQSQLTT SQPLSVQQEM TQDYEEIHPF 240 FDTIDDRQSY IDSKDVYESS SESSMKDTRH SVHQMAENEL KNAAACFSLT SFN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47870.1	2e-38	LBD family protein