PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu039512.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | WRKY | ||||||||
Protein Properties | Length: 346aa MW: 39003 Da PI: 9.7453 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 99.9 | 1.5e-31 | 279 | 337 | 3 | 60 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhek 60 D+y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ve++ +dp+++++tYegeHnh+k Oeu039512.1 279 DEYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVEKCLDDPSMLIVTYEGEHNHPK 337 9************************9988****************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 346 aa Download sequence |
MEKIEEANSA AVESCHRVLN IVSYPQDEHQ LRSLVEQTGE TIHKFKKVVS LLNTSCGHAR 60 VRVSKKILSP FPQNLFLENP IYRTDDHPKP LQLLPINSVE SHPLQEGGSN VKSDLTLRNY 120 SLELSSRGKD ISNESQQAPF RNYHFLEQQL QHQQQRYQHR LKQQAELMYC RSNSGISLNF 180 DSSMCTPTMS STRSLISSLS IDGSVANLER NAFHLVGAAR SADQNSYQLK RRCSGRGEDG 240 SGKCGSSGRC HCSKKRKHRV RRSIKVPAIS NKLADIPPDE YSWRKYGQKP IKGSPHPRGY 300 YKCSSMRGCP ARKHVEKCLD DPSMLIVTYE GEHNHPKFPS QSANT* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G30590.1 | 1e-108 | WRKY family protein |