PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu039466.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family LBD
Protein Properties Length: 277aa    MW: 30139.2 Da    PI: 8.9665
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu039466.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26089.15.6e-2841081100
       DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93 
                  +C++C+vlr++C+++C +  ++     p++q++++ +++k++G++ + +l++a p++ r+++++sl+yeA+ r+ +P++G+vg++ +++++l q ++e
  Oeu039466.1   4 SCNGCRVLRKGCSENCSIKSCLqwiksPESQANATVFLAKFYGRAGLANLINAGPQHLRPAIFRSLLYEACGRIVNPIHGSVGLMCSGSWNLVQNAVE 101
                  6************************************************************************************************9 PP

       DUF260  94 lallkee 100
                  ++l +++
  Oeu039466.1 102 AVLKGNP 108
                  9988765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MRLSCNGCRV LRKGCSENCS IKSCLQWIKS PESQANATVF LAKFYGRAGL ANLINAGPQH  60
LRPAIFRSLL YEACGRIVNP IHGSVGLMCS GSWNLVQNAV EAVLKGNPIT QIATDAAETK  120
HGPPFKAYDL RHVNKDENFA GIHGVRSRCR FKRSRGKARA SQLSFGSGHE DVNRSLSHES  180
SLSHQSVAAV DKDCREIENL ASAGPAESVD SESAHNGNNR VDEGEIVLEL TLGALPVKAK  240
GKPKEIKRKK AVDLAEKDDG MYRMELRLDY PASWEA*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1238250KAKGKPKEIKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02550.12e-82LBD family protein