PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu039337.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | LBD | ||||||||
Protein Properties | Length: 88aa MW: 9964.2 Da PI: 4.1766 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 42.3 | 2.1e-13 | 1 | 40 | 61 | 100 |
DUF260 61 lvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +vyeA+ar+rdPvyG++g i +lq+q+++l+aela+ ++e Oeu039337.1 1 MVYEANARLRDPVYGCAGAICQLQKQISELQAELAKSHAE 40 69*********************************99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 88 aa Download sequence |
MVYEANARLR DPVYGCAGAI CQLQKQISEL QAELAKSHAE ILNMQCQNAN LRQFIYQENC 60 PQEQPNENSP FFFDESILGA AWEPLWT* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07900.1 | 9e-27 | LBD family protein |