PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu039281.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

CO-like

Protein Properties

Length: 440aa MW: 49669.7 Da PI: 5.813

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu039281.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	29.5	1.5e-09	16	59	3	40
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40 +r C+++ +k+++l+C ++ +lC++C + H+ H++v Oeu039281.1 16 ARACDNCIRKRARLYCAADDAFLCQSCDASVHSAnplarrHERV 59 578*****************************657888888876 PP
2	CCT	66	1.1e-22	384	426	1	43
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkq 43 Rea+++RY+ Kr+tR+F+KkirYe+RK +Ae+RpR+KGrFvk Oeu039281.1 384 REARVSRYRAKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKG 426 9****************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MVSDRKLANA VGGKTARACD NCIRKRARLY CAADDAFLCQ SCDASVHSAN PLARRHERVR 60 LKISSIKSFD ESSLQISVPS WHQGFTRKAR TPRQKRHAEK LKTEEQIRYP LHLVPEICSE 120 EHSNEENDEQ LLYRVPNFDP FVAKLGTSAN ENVMNNDAEN TEAAGSTESK SMPNDLSQDM 180 NHLHGFLPSE MDLAEFAADV ESLLGKGLED ESFDIEGLGI LSREKDHHDS KECSLGSSEK 240 VKVEDEEVTE TVMAQAHENG AKIDLERETF EFNFDYDDYS PNTGEGEDVK APIIGDDQAI 300 IKKFEDFNEV VDDTDKKKKK TIMLSLDYVN VMSAWDEQRS PWTTGERPEL NFNECWPECM 360 GSCGTMHDMG MMSGHAAAMV DGGREARVSR YRAKRRTRLF SKKIRYEVRK LNAEKRPRMK 420 GRFVKGANFV ATAIPLLKK*

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MVSDRKLANA VGGKTARACD NCIRKRARLY CAADDAFLCQ SCDASVHSAN PLARRHERVR  60
LKISSIKSFD ESSLQISVPS WHQGFTRKAR TPRQKRHAEK LKTEEQIRYP LHLVPEICSE  120
EHSNEENDEQ LLYRVPNFDP FVAKLGTSAN ENVMNNDAEN TEAAGSTESK SMPNDLSQDM  180
NHLHGFLPSE MDLAEFAADV ESLLGKGLED ESFDIEGLGI LSREKDHHDS KECSLGSSEK  240
VKVEDEEVTE TVMAQAHENG AKIDLERETF EFNFDYDDYS PNTGEGEDVK APIIGDDQAI  300
IKKFEDFNEV VDDTDKKKKK TIMLSLDYVN VMSAWDEQRS PWTTGERPEL NFNECWPECM  360
GSCGTMHDMG MMSGHAAAMV DGGREARVSR YRAKRRTRLF SKKIRYEVRK LNAEKRPRMK  420
GRFVKGANFV ATAIPLLKK*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	395	411	RRTRLFSKKIRYEVRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25440.1	7e-94	CO-like family protein