PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu039136.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | C2H2 | ||||||||
Protein Properties | Length: 248aa MW: 27862.7 Da PI: 8.4873 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 19.6 | 2.4e-06 | 88 | 107 | 1 | 20 |
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C++C ksF+r nLk H+ Oeu039136.1 88 FSCHICYKSFNRYNNLKMHM 107 89*****************9 PP | |||||||
2 | zf-C2H2 | 17.7 | 1e-05 | 172 | 194 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cgk+F k + ++H +++ Oeu039136.1 172 FVCTKCGKPFAVKGDWRTHEKNC 194 89*****************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MEDEDCSTIA NNESETVSLH IGLPISSSSG SSGSGLSSSG EITDKDGFNV LSGLPSNSLN 60 KGQYWICLNK GQYWIPTPSQ IISGPTQFSC HICYKSFNRY NNLKMHMWGH GSQYRKGPES 120 LRGTQPTGML RLPCYCCAPE CKHNIDHPTA RPLKDFRILQ THYKRKHGTK SFVCTKCGKP 180 FAVKGDWRTH EKNCGKIWYC ICGSDFKHKR SLKDHIKVFG LGHQTLGIRI DFEEDDENLL 240 ETFHLKV* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57670.1 | 1e-106 | C2H2 family protein |