PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu038999.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 284aa    MW: 32258.3 Da    PI: 9.5731
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu038999.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.76.4e-092469346
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                      WT+eE +++  a + +  +   +W+ +a++++ g++ +++++ +  
      Oeu038999.1 24 VWTKEENKKFESALAVFDENtpnRWSMVASMIP-GKSVYDVINQYKE 69
                     6*****************99*************.*********9975 PP
2Myb_DNA-binding40.85e-13121165347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++ + +++G+g+W+ I+r +   +t+ q+ s+ qky
      Oeu038999.1 121 PWTEEEHRRFLLGLQEHGKGDWRNISRNFVISKTPTQVASHAQKY 165
                      8*****************************789***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
METLFQASFA SNSGLLMQQR KTTVWTKEEN KKFESALAVF DENTPNRWSM VASMIPGKSV  60
YDVINQYKEL VSDISDIEAG LVPVPVYLNS SFTLKLPDNH SFDVYRKRGR SYNQERKKGV  120
PWTEEEHRRF LLGLQEHGKG DWRNISRNFV ISKTPTQVAS HAQKYYLRQL SGGKDKRRPS  180
IHDITSVQLT KNCPSDNKKS PSSDNFSSVT FIQKSIGTPK MLLDWNHKNN GASMVFDSAY  240
DDPFITYPRE IASLGTCIVD TVAANRGFQF QFTGTFQSER SLE*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1106118RKRGRSYNQERKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.14e-81MYB family protein