PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu038904.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family LBD
Protein Properties Length: 161aa    MW: 18300 Da    PI: 8.1335
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu038904.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260127.36.9e-40111101100
       DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                  +CaaCk l+r+Ca++C +apyf +++pkkfa vhk+FGasn++k+l+++++e+red+++slvyeAe+r+rdP+yG++g i +l++++ +l+++l l++
  Oeu038904.1  11 SCAACKALKRRCATNCLFAPYFRKDEPKKFAKVHKVFGASNISKILNEVSDEQREDTVNSLVYEAEVRLRDPIYGCIGAIASLEKKMVELEHDLMLAR 108
                  6********************************************************************************************99987 PP

       DUF260  99 ee 100
                  ++
  Oeu038904.1 109 AR 110
                  65 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
MKSQVPRSRS SCAACKALKR RCATNCLFAP YFRKDEPKKF AKVHKVFGAS NISKILNEVS  60
DEQREDTVNS LVYEAEVRLR DPIYGCIGAI ASLEKKMVEL EHDLMLARAR LAFCVNQRTS  120
FLNEHENMAP WIHDTPESGI VEAFNQDLFS FNQFSHLPFL *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11090.15e-48LBD family protein