PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu038884.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

Trihelix

Protein Properties

Length: 464aa MW: 52750.6 Da PI: 6.3733

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu038884.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	74.4	2e-23	108	206	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdql 85 +W +++v++Li ++ +++++++++ +kk++W++vs++m e+gf +sp+qC++k+++lnkryk+++++ +k+ +++++++ +++d++ Oeu038884.1 108 KWNDNMVRLLIMIVFYIGDEVGSEGsdpakkkgggvlQKKGKWKSVSQAMIEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGtACRVVENQSLLDSM 205 7**************99999753366778899999******************************************55**********9 PP trihelix 86 e 86 + Oeu038884.1 206 D 206 8 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MESNAMPGGM YSSVNPGILG LEMSLNHKLP PQNPNQTQQQ QCRNNSMATY GHREGEYDLN 60 TQQSVKPWRP YSGKAKNQSL TLSDDDEPGP ENISDDGNMR MSPWQRVKWN DNMVRLLIMI 120 VFYIGDEVGS EGSDPAKKKG GGVLQKKGKW KSVSQAMIEK GFYVSPQQCE DKFNDLNKRY 180 KRVNDILGKG TACRVVENQS LLDSMDHLSP KMKEEVKKLL NSKHLFFREM CAYHNSCGHG 240 SGASGSGVGG NQHSPAEVAT EPSHTQFQSQ QQRCLHSSVN APVMPNLNRG ENEGSKLSKG 300 ASGEDEDDDD DEDGDEDDRD SYEDNDEVVD RGSRGHNHDH GDVNDTDGRS SRKKQSVFNS 360 PLIQQLNMEL VNMLQDGTKS PFERRQWIDA RLMHLEGQRV GIQFQAFELE KQRLKWLKFS 420 TKKEREMERE KLANERLRLE NERMVLLIRQ KELELLEHHH HRQ*

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MESNAMPGGM YSSVNPGILG LEMSLNHKLP PQNPNQTQQQ QCRNNSMATY GHREGEYDLN  60
TQQSVKPWRP YSGKAKNQSL TLSDDDEPGP ENISDDGNMR MSPWQRVKWN DNMVRLLIMI  120
VFYIGDEVGS EGSDPAKKKG GGVLQKKGKW KSVSQAMIEK GFYVSPQQCE DKFNDLNKRY  180
KRVNDILGKG TACRVVENQS LLDSMDHLSP KMKEEVKKLL NSKHLFFREM CAYHNSCGHG  240
SGASGSGVGG NQHSPAEVAT EPSHTQFQSQ QQRCLHSSVN APVMPNLNRG ENEGSKLSKG  300
ASGEDEDDDD DEDGDEDDRD SYEDNDEVVD RGSRGHNHDH GDVNDTDGRS SRKKQSVFNS  360
PLIQQLNMEL VNMLQDGTKS PFERRQWIDA RLMHLEGQRV GIQFQAFELE KQRLKWLKFS  420
TKKEREMERE KLANERLRLE NERMVLLIRQ KELELLEHHH HRQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10040.1	2e-66	Trihelix family protein