PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu038578.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 171aa MW: 19159.2 Da PI: 9.9297 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 59.9 | 3e-19 | 9 | 57 | 1 | 49 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49 k ien s+r++tf+kRr+g++KKA+ L++ C+ae+ vi +s+ g+++ + Oeu038578.1 9 KAIENVSKRHTTFTKRRQGLFKKAKDLCTKCEAEATVITVSKAGNIFAF 57 68******************************************99877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 171 aa Download sequence |
MVRRKVEIKA IENVSKRHTT FTKRRQGLFK KAKDLCTKCE AEATVITVSK AGNIFAFGHP 60 AVDPVVNRYL SYGNGDERVH GGNRMAAMEE EMLSLSKAER KVQTVMGKGR QEWDLAIGDL 120 EINELDEMEM VIRDIKRIAA ARSMEIVAGG GKDQEVKCFG KDSIVPYRRR * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36590.1 | 2e-21 | M-type_MADS family protein |