PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu038539.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

Nin-like

Protein Properties

Length: 857aa MW: 94699.6 Da PI: 5.9925

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu038539.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	93.4	1.7e-29	524	575	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isle+l++yFs+++kdAAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ Oeu038539.1 524 AEKTISLEVLQQYFSGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 575 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 857 aa Download sequence
MDLDLDLDSF WPSDQIFAAG NSSSPFLFSN PEQPCTPLWS FSDEKSPGAP AGSFRLSDCS 60 RSNPDATTQS LLGNDEKGKL PSPLEGLLPI DKPDGTCIIK ERMTQALRYF KDLTEQHVLA 120 QVWAPVKAGG RYVLTTSEQP FVLDPNSNGL HQYRLVSLMY MFSVDGDTDV LGLPGRVFRQ 180 KMPEWTPNVQ YYSSKEFSRL NHALHYNVRG TLALPVFEPS GQSCIGVVEL IMTSQKINYA 240 PEVDKVCKAL EAVNLKSSEI LDHQSTQICN EGRQNALAEI LEILTVVCET HTLPLAQTWV 300 PCRHRSVLAD GGGFKKTCSS FDGSCMGQVC MSTTDVAFYV VDAHMWGFRD ACAEHHLQKG 360 QGVTGRAFAS HNSCFCPDIT EFCKTEYPLV HYARMFGLKS SFAICLRSTH TENDDYVLEF 420 FLPPNIIVYR DQQIILESIF ETMKRHFGSL RVASGKDLEH ERQSTEFIKA STSEKLTSRP 480 ELASMSPPWL DCLPNGEKVE PDLLEQQPLI PGFAANSEKR RGKAEKTISL EVLQQYFSGS 540 LKDAAKSLGV CPTTMKRICR QHGISRWPSR KINKVNRSIS KLKHVIQSVQ GAEGGFNLTA 600 LATNSVPVAV GSISWPPSAD KSNLQTSPGC EGLNPSKSGI REERTGTPTS KGSCQCSPCL 660 GNSVSPIDER CINVEGSPEF PCQQIREINL SAAFPIPDAF VMVPQKPFGG MLIEDSGSSH 720 DLKTLCSPSE ALFDEHAPEN SWTRPLCPEM PQTSIRSDVK TITIKATYRD DIIRFRLCLD 780 QSIIKLKEEV AKRLKLELGT FDIKYLDDYH EWVLIACDAD LQECIDISRS TGGNIIRLCV 840 HDITANLGSS CESSGG*

Sequence ? help Back to Top

Protein Sequence Length: 857 aa Download sequence

MDLDLDLDSF WPSDQIFAAG NSSSPFLFSN PEQPCTPLWS FSDEKSPGAP AGSFRLSDCS  60
RSNPDATTQS LLGNDEKGKL PSPLEGLLPI DKPDGTCIIK ERMTQALRYF KDLTEQHVLA  120
QVWAPVKAGG RYVLTTSEQP FVLDPNSNGL HQYRLVSLMY MFSVDGDTDV LGLPGRVFRQ  180
KMPEWTPNVQ YYSSKEFSRL NHALHYNVRG TLALPVFEPS GQSCIGVVEL IMTSQKINYA  240
PEVDKVCKAL EAVNLKSSEI LDHQSTQICN EGRQNALAEI LEILTVVCET HTLPLAQTWV  300
PCRHRSVLAD GGGFKKTCSS FDGSCMGQVC MSTTDVAFYV VDAHMWGFRD ACAEHHLQKG  360
QGVTGRAFAS HNSCFCPDIT EFCKTEYPLV HYARMFGLKS SFAICLRSTH TENDDYVLEF  420
FLPPNIIVYR DQQIILESIF ETMKRHFGSL RVASGKDLEH ERQSTEFIKA STSEKLTSRP  480
ELASMSPPWL DCLPNGEKVE PDLLEQQPLI PGFAANSEKR RGKAEKTISL EVLQQYFSGS  540
LKDAAKSLGV CPTTMKRICR QHGISRWPSR KINKVNRSIS KLKHVIQSVQ GAEGGFNLTA  600
LATNSVPVAV GSISWPPSAD KSNLQTSPGC EGLNPSKSGI REERTGTPTS KGSCQCSPCL  660
GNSVSPIDER CINVEGSPEF PCQQIREINL SAAFPIPDAF VMVPQKPFGG MLIEDSGSSH  720
DLKTLCSPSE ALFDEHAPEN SWTRPLCPEM PQTSIRSDVK TITIKATYRD DIIRFRLCLD  780
QSIIKLKEEV AKRLKLELGT FDIKYLDDYH EWVLIACDAD LQECIDISRS TGGNIIRLCV  840
HDITANLGSS CESSGG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	0.0	Nin-like family protein