PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu038494.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | WRKY | ||||||||
Protein Properties | Length: 262aa MW: 29547.4 Da PI: 6.7936 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 85.6 | 4.6e-27 | 63 | 123 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 dDgynWrKYGqK + g+++prsYYrC ++ +C+++k+v+ s++dp+++eitY+g+H+++ Oeu038494.1 63 DDGYNWRKYGQKGILGAKYPRSYYRCKYRhlqNCSATKQVQGSDDDPTTFEITYKGTHTCK 123 8**************************99899***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 262 aa Download sequence |
MRHAGKVEAT SSVSVDGSSY SGDLKNNMNQ QEHKDTPKQR KQLHTWTELV RINSENGLEG 60 PTDDGYNWRK YGQKGILGAK YPRSYYRCKY RHLQNCSATK QVQGSDDDPT TFEITYKGTH 120 TCKHSANGVP QPASIGKQEL RHNSHKHQSQ TNQMLLNIRA DHRVQTEDLE KTEKPSVSSF 180 PSTFGCLGEN STFLISTLVD DNHFDSYSQF MSESNYLPYQ RSSFEGDHNL QFLESDVAEI 240 ISANTSTSNS PIRTMEFPVE P* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11070.2 | 2e-45 | WRKY family protein |