PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu038479.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | C2H2 | ||||||||
Protein Properties | Length: 156aa MW: 17056.7 Da PI: 9.2057 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.7 | 0.00081 | 30 | 52 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ F++ +L H +H Oeu038479.1 30 FECKTCNRQFPSFQELGGHRASH 52 89***********9999999888 PP | |||||||
2 | zf-C2H2 | 12 | 0.00064 | 70 | 92 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp Cg+ F L H+r+H Oeu038479.1 70 HECPVCGMEFAIGQALGGHMRKH 92 79*******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 156 aa Download sequence |
MKSMANCLML LSNGGGAFDS AVDGSAARVF ECKTCNRQFP SFQELGGHRA SHKKPRFMGE 60 QHSPEKPKTH ECPVCGMEFA IGQALGGHMR KHRTAAVNEN HQQPTAQPAL SLAPPYPHPI 120 VKRSNGRRVF CLDLNLTPLE NKFLLFGKMV PTIDC* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28710.1 | 5e-41 | C2H2 family protein |