PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu038471.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family ARR-B
Protein Properties Length: 874aa    MW: 96940.7 Da    PI: 6.8273
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu038471.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like59.47.3e-19304349551
      G2-like   5 rWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 
                  +Wt+ LH++Fv+av qL G+ +  Pk+i+elm+v+gLt+ +v+SHLQ
  Oeu038471.1 304 EWTQGLHDKFVDAVIQL-GEGRCFPKEIVELMNVPGLTRIQVASHLQ 349
                  7****************.9**************************** PP
2Myb_DNA-binding32.61.8e-10304349345
                      SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwq 45 
                       WT+ +++++vdav qlG g   +k I + m+  g+t+ q+ s++q
      Oeu038471.1 304 EWTQGLHDKFVDAVIQLGEGrcFPKEIVELMNvPGLTRIQVASHLQ 349
                      6********************************************9 PP
3Response_reg21.61.1e-0817223449108
                   EESSCTTSEHHHHHHHH.HHHT..TTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHH CS
  Response_reg  49 lDiempgmdGlellkei.reee..pklpiivvtahgeeedalealkaGakdflsKpfdpeelv 108
                   +Di m +++ l+++  +  +e+  ++l +i++ +++++++a  al+ Ga  fl Kp+++e+++
   Oeu038471.1 172 VDIVMANINSLDACAFMlLQEAvkMDLLVILMCDYDDNMMARSALEEGAFLFLKKPVKKENIM 234
                   58888888888888776444446799********************************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 874 aa     Download sequence    
MVYKDAKQPI GVRVKDLLSR MTLEEKIGQM AQIDRVAATA DIMKKHYLGS IISGGGSAPL  60
PHATAADWVK MVNDFQKGSL STRLAIPMIY GIDAVHGNNN IYNATIFPHN IGLGATRQVS  120
NHAAATEIFL EKILCHANQL CGKCWICINE EVKCVEYAST ALLTLSNEKA QVDIVMANIN  180
SLDACAFMLL QEAVKMDLLV ILMCDYDDNM MARSALEEGA FLFLKKPVKK ENIMYLWQHL  240
WREKRLKIKE KEQLREMLVY NKKFHGFVAQ EDISVENVTS HDNKVGENGH NSGKEVRSRK  300
VWTEWTQGLH DKFVDAVIQL GEGRCFPKEI VELMNVPGLT RIQVASHLQV SNHAAATEIF  360
LEEILCHANQ LCGKCWICIN EEVHCIRDPD LLRRIGNATA VEVRATGIPY AFAPCIAVCR  420
DPRWGRCYES YSEDPKIVEE MTDIILGLQG EISNGSEKGV PYVAGKNKVA ACAKHFVGDG  480
GTTKGIDENN TLIDMQGLLR IHMPAYYDSI DKGVATVMIS YSSWNGKKMH ANHELITGFL  540
KGKLQFKGFV ISDWQGIDRI TSPPHSNYTY SVLESVLAGI DMIMIPYNFT EFIHELTCLV  600
KKNFIPMERI DDAVGRILLV KFTLGLFENP LADLSLVNEV GSQAHRNLAR EAVRKSLVLL  660
KNGKNANDSV LPLSKKLSKI LVAGSHADNL GYQCGGWTIA WQGFSGNNYT SGTTILSAIN  720
STVEKNTEVV YSENPDSEYV KSQNFNHAVV IVGEHPYTET KGDSKTLKMI DPGPDVIRNV  780
CGAVKCVVII ISGRPIVIEP YITEIDALVA AWLPGSEGQR VTDVLFGDYG FTGKLPRTWF  840
KTVDQLPMNI GDSHYDPLFP FGFGLTTKAT VSR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.11e-22ARR-B family protein