PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu038420.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | WRKY | ||||||||
Protein Properties | Length: 258aa MW: 28531.9 Da PI: 6.3034 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 104.6 | 5.3e-33 | 89 | 145 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 dDgy+WrKYGqK++k+s++prsYYrCt ++C++kk+vers++dp++++itYeg H h Oeu038420.1 89 DDGYKWRKYGQKSIKNSPHPRSYYRCTNPRCSAKKQVERSSDDPDILIITYEGLHLH 145 8******************************************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MPYQETSMET NSITSTDSSI NPQVVSALHS SPTIQDDIER ALLNTNYGIQ PVAISEACRT 60 SLMLERGLNR EQESKHTMRI KCCGNVMSDD GYKWRKYGQK SIKNSPHPRS YYRCTNPRCS 120 AKKQVERSSD DPDILIITYE GLHLHFAYPF LLLNPLDQID PPTKKQKGHR PISPAQDYSA 180 EANQIFSSSP VLGELDGPEL PGPQGLLEDV VPLLIRKPLV NAAFSNSSSS ESSSSPTSHT 240 SFSWSLDDSS LGFHTNM* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43290.1 | 7e-42 | WRKY family protein |