PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu038206.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 347aa MW: 39794.6 Da PI: 7.3864

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu038206.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57	4.5e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WTteEd++l+d++++ G g+W+t ++ g+ R++k+c++rw +yl Oeu038206.1 14 KGPWTTEEDQKLIDYIQKNGYGNWRTLPKNAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	51.2	3e-16	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ lG++ W+ Ia+ ++ gRt++++k++w+++ Oeu038206.1 67 RGRFSFEEEEVIIQLHSILGNK-WSVIAASLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MGRAPCCDKN GLRKGPWTTE EDQKLIDYIQ KNGYGNWRTL PKNAGLQRCG KSCRLRWTNY 60 LRPDIKRGRF SFEEEEVIIQ LHSILGNKWS VIAASLPGRT DNEIKNYWNT HIRKRLLRMG 120 IDPITHMPRL DLLDLSAILN SSLYNSSQID FSRLLGMQNL VNPQFLRLDN LLFQNQNQSQ 180 DFLLQTNAQD YQTCNNYQFL NQIPPLVQPC TTLETPSVPL DQFHVTNFNP RNCQLNEWQT 240 NQIVPPMPKD YAPLSNYGYD YVYGSDQSIM DHPRSETSNF QSNGSSNFSS FQSVLSNISS 300 PSSSPTRFDS NSIKLTSSST EEEKESYGSN LLKFNIADML DVNRFM*

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MGRAPCCDKN GLRKGPWTTE EDQKLIDYIQ KNGYGNWRTL PKNAGLQRCG KSCRLRWTNY  60
LRPDIKRGRF SFEEEEVIIQ LHSILGNKWS VIAASLPGRT DNEIKNYWNT HIRKRLLRMG  120
IDPITHMPRL DLLDLSAILN SSLYNSSQID FSRLLGMQNL VNPQFLRLDN LLFQNQNQSQ  180
DFLLQTNAQD YQTCNNYQFL NQIPPLVQPC TTLETPSVPL DQFHVTNFNP RNCQLNEWQT  240
NQIVPPMPKD YAPLSNYGYD YVYGSDQSIM DHPRSETSNF QSNGSSNFSS FQSVLSNISS  300
PSSSPTRFDS NSIKLTSSST EEEKESYGSN LLKFNIADML DVNRFM*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	1e-104	MYB family protein