PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu038087.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 348aa MW: 39111.8 Da PI: 5.4392

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu038087.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	62.5	8.7e-20	17	64	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv++ +++G g+Wk +++ g++R++k+c++rw +yl Oeu038087.1 17 KGPWTPEEDQKLVNCTQKYGHGNWKEVSKLAGLNRCGKSCRLRWTNYL 64 79********************************************97 PP
2	Myb_DNA-binding	56.5	6.5e-18	70	115	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +++eE++ +++++++lG++ W+tIa++++ gRt++++k++w+++l Oeu038087.1 70 RGTFSEEEEQTILELHALLGNK-WSTIASRLP-GRTDNEIKNFWNTHL 115 899*****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MEGSSTSSWD ETNGIKKGPW TPEEDQKLVN CTQKYGHGNW KEVSKLAGLN RCGKSCRLRW 60 TNYLRPDIKR GTFSEEEEQT ILELHALLGN KWSTIASRLP GRTDNEIKNF WNTHLKKKLF 120 RRGIDPTTHM PRTDNLLMNS LANIPPDQLL AAVNSICINS ALACQDSTTA IEFAKMLYLG 180 NILQFLNPSN STNIEQYPAP LILDSQLEAL LYSNSAPYTP AFTSTFPNLN VSQTIFHPEV 240 EELSIKSNRT FTQQIRDTSE YGTSSLCNNY SIPELVPASS PESFTVNTEY QTTKSYIISP 300 KDQFSNSSTS TTFDVLGDLM DDEASKYFWK QVTEYPRHFT VEAAAAI*

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MEGSSTSSWD ETNGIKKGPW TPEEDQKLVN CTQKYGHGNW KEVSKLAGLN RCGKSCRLRW  60
TNYLRPDIKR GTFSEEEEQT ILELHALLGN KWSTIASRLP GRTDNEIKNF WNTHLKKKLF  120
RRGIDPTTHM PRTDNLLMNS LANIPPDQLL AAVNSICINS ALACQDSTTA IEFAKMLYLG  180
NILQFLNPSN STNIEQYPAP LILDSQLEAL LYSNSAPYTP AFTSTFPNLN VSQTIFHPEV  240
EELSIKSNRT FTQQIRDTSE YGTSSLCNNY SIPELVPASS PESFTVNTEY QTTKSYIISP  300
KDQFSNSSTS TTFDVLGDLM DDEASKYFWK QVTEYPRHFT VEAAAAI*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16770.2	9e-79	MYB family protein