PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu037911.2
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family LBD
Protein Properties Length: 290aa    MW: 30122.4 Da    PI: 6.7547
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu037911.2genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260113.51.4e-3535122187
       DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqql 87 
                  +C aCk+lrrkC+++C++apyf ++q ++ fa+vhk+FGasnv+kll ++p ++r da+ +++yeA+ r+rdPvyG+v++i++lqqq 
  Oeu037911.2  35 PCGACKFLRRKCVPGCIFAPYFDQDQgAAYFAAVHKVFGASNVSKLLLHIPLHKRLDAVVTICYEAQSRLRDPVYGCVSHIFALQQQC 122
                  7*************************8899********************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MSSKVSCDGT SVEAGGCGGA GSSGGGGGGG GSNGPCGACK FLRRKCVPGC IFAPYFDQDQ  60
GAAYFAAVHK VFGASNVSKL LLHIPLHKRL DAVVTICYEA QSRLRDPVYG CVSHIFALQQ  120
QCLLQYIHYC SASAMHMSPG FVAFRGGCGV ELGVMNLQSD LSYLQGHLAG LQIPTPPPPP  180
PPPVQPLVMP PVLSISDLPT SAIVPPTYDL SSLFDPVGQT QWMLQLPHQQ TDPCQYGGGA  240
TRAPPEMSPS GSGAGGGDDL QELARELLQQ HANPTVPCTR APPLPPDSK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45420.15e-60LBD family protein