PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu037895.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 614aa    MW: 67032.2 Da    PI: 5.071
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu037895.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS131.68.8e-411823262147
         GRAS   2 velLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 
                  v+ L++ Ae++++++ +  q  Larl+++ +sp+g+p+qR+a+yf+eAL++ l++    l  + +++++s+++ +++++a+k+fs +sPi+ fs  ta
  Oeu037895.1 182 VDELIRLAECFETNSPQVGQLSLARLNQQlRSPTGKPLQRAAFYFKEALQSLLSG----L--TRRTRPASSSEIIQAIKAQKMFSVISPIPMFSSCTA 273
                  678************************998************************9....3..45666666678************************* PP

         GRAS  99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpeg....ppslRiTgv 147
                  Nqa+lea+eg+++vHiiDfdi+ G QW+++l++La+++++    p+ lRiT+ 
  Oeu037895.1 274 NQAVLEALEGCTHVHIIDFDIGLGNQWASFLKELADKAGSgkaiPALLRITAT 326
                  *************************************9444555789****96 PP
2GRAS236.79.8e-7332661277374
         GRAS  77 elaalklfsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpeg....ppslRiTgvgspesgskeeleetgerLakfAe 170
                  +++a+k+fs +sPi+ fs  taNqa+lea+eg+++vHiiDfdi+ G QW+++l++La+++++    p+ lRiT+++++e   ++e + ++e+L++fA+
  Oeu037895.1 326 TIKAQKMFSVISPIPMFSSCTANQAVLEALEGCTHVHIIDFDIGLGNQWASFLKELADKAGSgkaiPALLRITAIVPEE--YATEARLIRENLSQFAR 421
                  5899*******************************************************9444555789********66..999************** PP

         GRAS 171 elgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh..nsesFlerflealeyysa 266
                  el+++++++++  +++e+ ++e++++  gE++aV l+ ++++ +          + +L+ ++++sP vvv+ve+e++   +++s+ + +++ l++ys+
  Oeu037895.1 422 ELNIRVDIDFVPISNFESSSFEAIKLMDGENVAVLLSPAIFQHV---------GTGFLNDLRRISPLVVVHVENEVQVgfEAPSYHQAVIDGLDFYST 510
                  ***********9***************************99998.........368*******************98866888*************** PP

         GRAS 267 lfdsl.eaklpres...eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvl 360
                  lf+sl +a+++      ++ +k+E  ++ ++i+++  c  +           Wre+l +aG+++v ls++a  qa++llr  k++g++v +++++++l
  Oeu037895.1 511 LFESLeAANVSGGGggdDWIRKIETYVFLPKIMEAAGCGRKP----------WREALVAAGLRQVGLSQFADFQAECLLRGAKVRGFHVAKRQEEMLL 598
                  *****6677765545559999*************99998775..........********************************************** PP

         GRAS 361 gWkdrpLvsvSaWr 374
                  +W++rpLv++SaWr
  Oeu037895.1 599 CWRNRPLVATSAWR 612
                  *************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 614 aa     Download sequence    
MKVSFSGNNH NNQSLNSKPV VTTTWTTTSL GNTAPTISPY EPKSVLELYG SPIPVAKNAI  60
SNCTTSGIST IPDDPLQLGD LPLSHQFEDW DLGLDDDLIP VSKHASQLGT LSDQQYASIP  120
EFISVSSFDS STQVEPSDFS LSSDIITTAP LSHSNNIIHP FELSGEIQNL NNNNLNVGFE  180
YVDELIRLAE CFETNSPQVG QLSLARLNQQ LRSPTGKPLQ RAAFYFKEAL QSLLSGLTRR  240
TRPASSSEII QAIKAQKMFS VISPIPMFSS CTANQAVLEA LEGCTHVHII DFDIGLGNQW  300
ASFLKELADK AGSGKAIPAL LRITATIKAQ KMFSVISPIP MFSSCTANQA VLEALEGCTH  360
VHIIDFDIGL GNQWASFLKE LADKAGSGKA IPALLRITAI VPEEYATEAR LIRENLSQFA  420
RELNIRVDID FVPISNFESS SFEAIKLMDG ENVAVLLSPA IFQHVGTGFL NDLRRISPLV  480
VVHVENEVQV GFEAPSYHQA VIDGLDFYST LFESLEAANV SGGGGGDDWI RKIETYVFLP  540
KIMEAAGCGR KPWREALVAA GLRQVGLSQF ADFQAECLLR GAKVRGFHVA KRQEEMLLCW  600
RNRPLVATSA WRY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36710.14e-81GRAS family protein