PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu037771.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family M-type_MADS
Protein Properties Length: 319aa    MW: 35370.8 Da    PI: 8.1115
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu037771.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF64.21.4e-202468145
                 S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
       SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                 k+ie  snrqvtfskRr g++KKA EL+vL++ae+a+i+ s  gk
  Oeu037771.1 24 KKIERLSNRQVTFSKRRVGLFKKARELCVLTGAEIAIIVQSVAGK 68
                 689999**********************************99886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MVMNKESDAV MKKKTLGRRK IDMKKIERLS NRQVTFSKRR VGLFKKAREL CVLTGAEIAI  60
IVQSVAGKRF YAFGHNNVDS VIDRFENGSP VGSVENTGKT PDHGKDYSGI CKESEAENRV  120
IDGGGFWWAE KVDGLELEEL ERYNAALEEL MKNLDKKAHS SIEPDPRFVF KFDEEPECSP  180
KVFQVNGNVK QSVFTCNFRL RNSGTWKPWG RLEAWQEGNG IDVLGYHFEL ISEGGIDNRP  240
LANSTISTKN GGKFSIGVTT GSTPMNSPNS CFDLSSGSSS GSEFRSTTGS GSWAYMFYRG  300
FVMSATFEGE GKCNRPEV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.16e-30M-type_MADS family protein