PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu037272.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

LBD

Protein Properties

Length: 321aa MW: 35277.3 Da PI: 6.3082

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu037272.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	89.9	3.2e-28	106	206	1	96
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93 +C++C++lr++C+++C l++ + +++q++++ +v+k+FG++ ++++l+++p+++r+++++sl++eA+ r+ +Pv+Gavg++++++++++++++e Oeu037272.2 106 SCNGCRILRKGCNENCLLRQSLqgietAEAQANATVFVAKFFGRAGLMSFLSSVPDSQRSALFRSLLFEACGRTINPVNGAVGLLWAGNWHVCKSAVE 203 6*******************9999777889*************************************************************999 PP DUF260 94 lal 96 ++l Oeu037272.2 204 TVL 206 876 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
MVMIERLLGG PNLELFLQDT CPLQVLCPLR IPLQFPLLQE GIFSYSFKKL DLGIKDFGFE 60 QCEEGYSKEE EDGGGAILTR KCDRRGVLGG DDGGWGCRWG ETLKMSCNGC RILRKGCNEN 120 CLLRQSLQGI ETAEAQANAT VFVAKFFGRA GLMSFLSSVP DSQRSALFRS LLFEACGRTI 180 NPVNGAVGLL WAGNWHVCKS AVETVLCGGV LKPLPEFSGF AQPPEFDEIP EDLHGSKDLN 240 LRLKKGGLHN TSHDLDLGLK AGFPARMTAG SRVNWRTEKG RLTSPPSDES ETTTLESASM 300 YHQELQHHDG HETKLLRLFV *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G67420.1	1e-62	LBD family protein